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Headaches and Migraines During Perimenopause: A Practical Guide

Headaches and migraines often escalate during perimenopause due to fluctuating estrogen. This guide explains the causes and outlines effective prevention and treatment strategies.

4 min readFebruary 28, 2026

Why Perimenopause Worsens Headaches and Migraines

Estrogen affects serotonin, dopamine, and other neurotransmitters that regulate pain processing in the brain. During perimenopause, estrogen does not simply decline; it swings unpredictably from high to low, sometimes within the same week. These rapid drops are particularly potent migraine triggers. Women who previously had migraines linked to their period (menstrual migraine) often find their pattern worsens during perimenopause for the same reason: falling estrogen destabilises the brain's pain threshold. New-onset headaches are also common in women who have never had significant headaches before entering this transition.

Types of Headaches in Perimenopause

Tension headaches produce a band-like pressure around the head and are often stress- or posture-related, though hormonal fluctuation can lower the threshold at which they occur. Hormonal migraines typically cause throbbing pain on one side of the head, often accompanied by nausea, light sensitivity, and sound sensitivity. They tend to cluster around the days when estrogen drops sharply. Some women experience a migraine aura (visual disturbances, tingling, or speech changes) before pain begins. Keeping a headache diary noting pain intensity, timing, and potential triggers such as disrupted sleep or missed meals helps identify patterns and guides treatment.

When to Seek Urgent or Specialist Assessment

Most perimenopausal headaches are benign but a few situations need prompt evaluation. See a doctor urgently for a headache that comes on suddenly and is the worst of your life, headache with fever and stiff neck, headache with confusion or speech changes, or any headache following a head injury. See your GP if new headaches are frequent, getting progressively worse over weeks, or significantly affecting your daily life. If you have migraines with aura, specific precautions apply before starting any combined hormonal therapy.

Prevention Strategies

Keeping blood sugar stable by eating regularly (skipping meals is a well-established migraine trigger), staying well hydrated, maintaining a consistent sleep schedule, and limiting alcohol and caffeine are the foundations of prevention. Regular aerobic exercise reduces migraine frequency in research studies. Stress management through techniques like slow breathing, yoga, or mindfulness lowers the overall neurological reactivity that makes migraines more likely. Identifying and managing individual triggers, which commonly include red wine, aged cheese, dehydration, bright lights, and strong smells, is valuable alongside these lifestyle measures.

Supplements and Natural Approaches

Magnesium glycinate (400 mg daily) has the strongest evidence of any supplement for migraine prevention and is particularly relevant in perimenopause when magnesium is often low. Riboflavin (vitamin B2, 400 mg daily) and CoQ10 (300 mg daily) are also recommended by neurology guidelines for prevention. Butterbur extract (Petasites hybridus) has good evidence but requires a standardised, PA-free product due to liver safety concerns. Discuss all supplements with your doctor if you are also on medications.

Medical Treatment and HRT Considerations

Triptans remain the most effective acute treatment for migraines and are safe for most women. For frequent migraines, preventive medications including low-dose beta-blockers, amitriptyline, or topiramate may be offered. HRT can be helpful for hormonally driven headaches, particularly transdermal (patch, gel, or spray) estrogen, which produces steadier hormone levels and fewer peaks and troughs than oral forms. However, combined HRT is not suitable for women with migraine with aura due to stroke risk. Women in this group may be offered estrogen-only routes. A GP or neurologist can help you navigate these options.

Related reading

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GuidesYour Nervous System During Perimenopause: A Practical Guide
Medical disclaimerThis content is for informational purposes only and does not constitute medical advice, diagnosis, or treatment. Always consult a qualified healthcare provider with questions about a medical condition. PeriPlan is not a substitute for professional medical advice. If you are experiencing severe or concerning symptoms, please contact your doctor or emergency services immediately.

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